Resultados do CDD

Por forma a obter informações sobre os domínios das proteínas, recorremos à base de dados CDD (https://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi) e retiramos para cada proteína e para cada domínio as seguintes informações:

• Acession Number

• Name

• Description

import os, sys, inspect
import pandas as pd
from IPython.core.display import display, HTML

def import_modules():
    """
    Importar os módulos que desenvolvemos neste trabalho.
    """
    current_dir = os.path.dirname(os.path.abspath(inspect.getfile(inspect.currentframe())))
    parent_dir = os.path.dirname(current_dir)
    sys.path.insert(0, parent_dir)

def itemize(l):
    """
    Criar uma lista HTML dada uma lista.
    """
    html = "<ul>"
    for i in l:
        html += "<li>"
        if isinstance(i, dict):
            html += itemize_dict(i)
        else:
            html += i
        html +="</li>"
    html += "</ul>"
    return html

def itemize_dict(d):
    """
    Criar uma lista HTML dado um dicionário.
    """
    html = "<ul style=\"list-style-type: square\">"
    for k in d:
        html += "<li><strong>" + k + ":</strong> " + str(d[k]) + "</li>"  
    html += "</ul>"
    return html
    
def main():
    import_modules()
    import util.rw as rw
    
    # mostra todas as linhas
    pd.options.display.max_rows = 250
    
    # não truncar informação
    pd.set_option('display.max_colwidth', -1)

    domains = rw.read_json("files/domains.json")

    df = pd.DataFrame(domains).transpose()
    df["domains"] = df["domains"].apply(itemize)
    display(HTML(df.to_html(escape=False)))

    
main()

	domains
lpg0232	accession: COG0735 name: Fur desc: Fe2+ or Zn2+ uptake regulation protein [Inorganic ion transport and metabolism]
lpg0233	accession: cd02002 name: TPP_BFDC desc: Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module accession: pfam02776 name: TPP_enzyme_N desc: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain accession: pfam00205 name: TPP_enzyme_M desc: Thiamine pyrophosphate enzyme, central domain accession: COG0028 name: IlvB desc: Acetolactate synthase large subunit or other thiamine pyrophosphate-requiring enzyme
lpg0234	accession: pfam12252 name: SidE desc: Dot/Icm substrate protein This family of proteins is found in bacteria
lpg0235	accession: cl01553 name: GFA super family desc: Glutathione-dependent formaldehyde-activating enzyme
lpg0237	accession: pfam12695 name: Abhydrolase_5 desc: Alpha/beta hydrolase family accession: cl21494 name: Abhydrolase super family desc: alpha/beta hydrolases
lpg0238	accession: cd07119 name: ALDH_BADH-GbsA desc: Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like
lpg0239	accession: cl18945 name: AAT_I super family desc: Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes accession: COG0160 name: GabT desc: 4-aminobutyrate aminotransferase or related aminotransferase
lpg0241	accession: TIGR03814 name: Gln_ase desc: glutaminase A
lpg0242	accession: cl21454 name: NADB_Rossmann super family desc: Rossmann-fold NAD(P)(+)-binding proteins accession: COG0111 name: SerA desc: Phosphoglycerate dehydrogenase or related dehydrogenase
lpg0243	accession: PRK07578 name: PRK07578 desc: short chain dehydrogenase Provisional
lpg0244	accession: pfam02852 name: Pyr_redox_dim desc: Pyridine nucleotide-disulphide oxidoreductase, dimerization domain accession: pfam00070 name: Pyr_redox desc: Pyridine nucleotide-disulphide oxidoreductase accession: PRK06370 name: PRK06370 desc: mercuric reductase
lpg0245	accession: pfam05088 name: Bac_GDH desc: Bacterial NAD-glutamate dehydrogenase accession: COG2902 name: Gdh2 desc: NAD-specific glutamate dehydrogenase [Amino acid transport and metabolism]
lpg0248	accession: cd03034 name: ArsC_ArsC desc: Arsenate Reductase (ArsC) family, ArsC subfamily
lpg0249	accession: cl00615 name: Membrane-FADS-like super family desc: The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane ... accession: cl24015 name: MULE super family desc: MULE transposase domain This domain was identified by Babu and colleagues. accession: pfam00487 name: FA_desaturase desc: Fatty acid desaturase
lpg0250	accession: cd00268 name: DEADc desc: DEAD-box helicases. accession: cd00079 name: HELICc desc: Helicase superfamily c-terminal domain
lpg0251	accession: cl17169 name: RRM_SF super family desc: RNA recognition motif (RRM) superfamily accession: COG0724 name: RRM desc: RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
lpg0252	accession: PRK11212 name: PRK11212 desc: hypothetical protein Provisional
lpg0253	accession: pfam00583 name: Acetyltransf_1 desc: Acetyltransferase (GNAT) family accession: COG1670 name: RimL desc: Protein N-acetyltransferase, RimJ/RimL family
lpg0255	accession: pfam02321 name: OEP desc: Outer membrane efflux protein accession: pfam02321 name: OEP desc: Outer membrane efflux protein
lpg0256	accession: pfam13515 name: FUSC_2 desc: Fusaric acid resistance protein-like
lpg0257	accession: pfam13533 name: Biotin_lipoyl_2 desc: Biotin-lipoyl like accession: pfam13437 name: HlyD_3 desc: HlyD family secretion protein accession: COG1566 name: EmrA desc: Multidrug resistance efflux pump [Defense mechanisms]
lpg0261	accession: cl21562 name: DDE_Tnp_4 super family desc: DDE superfamily endonuclease accession: COG3293 name: COG3293 desc: Transposase [Mobilome: prophages, transposons]
lpg0262	accession: cd10030 name: UDG_F4_TTUDGA_like desc: Family 4 Uracil-DNA glycosylase (UDG), found exclusively in thermophilic organisms
lpg0263	accession: cd06174 name: MFS desc: Major Facilitator Superfamily (MFS) accession: COG2270 name: BtlA desc: MFS-type transporter involved in bile tolerance, Atg22 family
lpg0264	accession: cd06583 name: PGRP desc: Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors
lpg0265	accession: cd13887 name: CuRO_2_MCO_like_2 desc: The second cupredoxin domain of uncharacterized multicopper oxidase accession: cd13896 name: CuRO_3_CopA desc: The third cupredoxin domain of CopA copper resistance protein family accession: cd13865 name: CuRO_1_LCC_like_3 desc: The second cupredoxin domain of uncharacterized multicopper oxidase accession: COG2132 name: SufI desc: Multicopper oxidase with three cupredoxin domains
lpg0267	accession: cl00459 name: MIT_CorA-like super family desc: metal ion transporter CorA-like divalent cation transporter superfamily
lpg0268	accession: pfam13023 name: HD_3 desc: HD domain HD domains are metal dependent phosphohydrolases.
lpg0269	accession: cl21455 name: P-loop_NTPase super family desc: P-loop containing Nucleoside Triphosphate Hydrolases accession: cl14615 name: PI-PLCc_GDPD_SF super family desc: Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases
lpg0270	accession: cd01570 name: NAPRTase_A desc: Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. accession: PRK09243 name: PRK09243 desc: nicotinate phosphoribosyltransferase
lpg0271	accession: cd01011 name: nicotinamidase desc: Nicotinamidase/pyrazinamidase (PZase).
lpg0272	accession: cd08351 name: ChaP_like desc: ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha)
lpg0273	accession: cd06174 name: MFS desc: Major Facilitator Superfamily (MFS)
lpg0274	accession: cd08422 name: PBP2_CrgA_like desc: The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA accession: pfam00126 name: HTH_1 desc: Bacterial regulatory helix-turn-helix protein, lysR family accession: COG0583 name: LysR desc: DNA-binding transcriptional regulator, LysR family [Transcription]
lpg0275	accession: pfam00561 name: Abhydrolase_1 desc: alpha/beta hydrolase fold This catalytic domain is found in a very wide range of enzymes.
lpg0276	accession: pfam00617 name: RasGEF desc: RasGEF domain Guanine nucleotide exchange factor for Ras-like small GTPases.
lpg0277	accession: cd01948 name: EAL desc: EAL domain. This domain is found in diverse bacterial signaling proteins. accession: cd01949 name: GGDEF desc: Diguanylate-cyclase (DGC) or GGDEF domain accession: COG0784 name: CheY desc: CheY chemotaxis protein or a CheY-like REC (receiver) domain [Signal transduction mechanisms] accession: smart00091 name: PAS desc: PAS domain PAS motifs appear in archaea, eubacteria and eukarya.
lpg0278	accession: pfam02518 name: HATPase_c desc: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase accession: cd00130 name: PAS desc: PAS domain PAS motifs appear in archaea, eubacteria and eukarya. accession: pfam08447 name: PAS_3 desc: PAS fold
lpg0279	accession: smart00897 name: FIST desc: FIST N domain The FIST N domain is a novel sensory domain accession: pfam10442 name: FIST_C desc: FIST C domain The FIST C domain is a novel sensory domain
lpg0280	accession: cd05466 name: PBP2_LTTR_substrate desc: The substrate binding domain of LysR-type transcriptional regulators (LTTRs) accession: pfam00126 name: HTH_1 desc: Bacterial regulatory helix-turn-helix protein, lysR family accession: COG0583 name: LysR desc: DNA-binding transcriptional regulator, LysR family [Transcription]
lpg0281	accession: cl00456 name: SLC5-6-like_sbd super family desc: Solute carrier families 5 and 6-like solute binding domain
lpg0282	accession: pfam13847 name: Methyltransf_31 desc: Methyltransferase domain This family appears to be have methyltransferase activity. accession: TIGR02072 name: BioC desc: malonyl-acyl carrier protein O-methyltransferase BioC
lpg0283	accession: cd05302 name: FDH desc: NAD-dependent Formate Dehydrogenase (FDH) accession: PRK07574 name: PRK07574 desc: formate dehydrogenase Provisional
lpg0286	accession: cl21454 name: NADB_Rossmann super family desc: Rossmann-fold NAD(P)(+)-binding proteins accession: COG4221 name: YdfG desc: NADP-dependent 3-hydroxy acid dehydrogenase YdfG [Energy production and conversion]
lpg0287	accession: pfam09285 name: Elong-fact-P_C desc: Elongation factor P, C-terminal accession: cd04470 name: S1_EF-P_repeat_1 desc: S1_EF-P_repeat_1: Translation elongation factor P (EF-P), S1-like RNA-binding domain accession: pfam08207 name: EFP_N desc: Elongation factor P (EF-P) KOW-like domain accession: PRK00529 name: PRK00529 desc: elongation factor P
lpg0288	accession: cl23776 name: EFP_modif_epmB super family desc: EF-P beta-lysylation protein EpmB Members of this radical SAM protein subfamily
lpg0289	accession: cd09168 name: PLDc_PaPPK1_C2_like desc: Catalytic C-terminal domain accession: cl15239 name: PLDc_SF super family desc: Catalytic domain of phospholipase D superfamily proteins accession: pfam02503 name: PP_kinase desc: Polyphosphate kinase middle domain accession: pfam13089 name: PP_kinase_N desc: Polyphosphate kinase N-terminal domain accession: PRK05443 name: PRK05443 desc: polyphosphate kinase Provisional
lpg0290	accession: cl11396 name: Patatin_and_cPLA2 super family desc: Patatins and Phospholipases Patatin-like phospholipase.
lpg0291	accession: pfam02417 name: Chromate_transp desc: Chromate transporter Members of this family probably act as chromate transporters
lpg0293	accession: pfam09317 name: DUF1974 desc: Domain of unknown function (DUF1974) accession: cd00567 name: ACAD desc: Acyl-CoA dehydrogenase accession: pfam02771 name: Acyl-CoA_dh_N desc: Acyl-CoA dehydrogenase, N-terminal domain accession: PRK13026 name: PRK13026 desc: acyl-CoA dehydrogenase
lpg0295	accession: cd06422 name: NTP_transferase_like_1 desc: NTP_transferase_like_1 is a member of the nucleotidyl transferase family accession: COG1208 name: GCD1 desc: NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis
lpg0296	accession: cl21453 name: PKc_like super family desc: Protein Kinases, catalytic domain accession: pfam01636 name: APH desc: Phosphotransferase enzyme family
lpg0297	accession: pfam04453 name: OstA_C desc: Organic solvent tolerance protein accession: cl21541 name: OstA super family desc: OstA-like protein This family of proteins are mostly uncharacterized. accession: COG1452 name: LptD desc: LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA)
lpg0298	accession: cl21568 name: SurA_N_3 super family desc: SurA N-terminal domain This domain is found at the N-terminus of the chaperone SurA. accession: pfam13616 name: Rotamase_3 desc: PPIC-type PPIASE domain Rotamases increase the rate of protein folding accession: pfam00639 name: Rotamase desc: PPIC-type PPIASE domain Rotamases increase the rate of protein folding
lpg0299	accession: TIGR00557 name: pdxA desc: 4-hydroxythreonine-4-phosphate dehydrogenase
lpg0300	accession: pfam00186 name: DHFR_1 desc: Dihydrofolate reductase
lpg0301	accession: cl02743 name: DM9 super family desc: Repeats found in Drosophila proteins accession: cl02743 name: DM9 super family desc: Repeats found in Drosophila proteins accession: pfam11901 name: DUF3421 desc: Protein of unknown function (DUF3421)
lpg0314	accession: cd01884 name: EF_Tu desc: Elongation Factor Tu (EF-Tu) GTP-binding proteins EF-Tu subfamily. accession: cd03707 name: EFTU_III desc: Domain III of Elongation Factor (EF) Tu accession: cd03697 name: EFTU_II desc: Domain II of elongation factor Tu accession: PRK00049 name: PRK00049 desc: elongation factor Tu
lpg0316	accession: PRK05740 name: secE desc: preprotein translocase subunit SecE
lpg0317	accession: cd09891 name: NGN_Bact_1 desc: Bacterial N-Utilization Substance G (NusG) N-terminal (NGN) domain, subgroup 1 accession: cd06091 name: KOW_NusG desc: NusG contains an NGN domain at its N-terminus and KOW motif at its C-terminus accession: PRK05609 name: nusG desc: transcription antitermination protein NusG
lpg0318	accession: cd00349 name: Ribosomal_L11 desc: Ribosomal protein L11. accession: PRK00140 name: rplK desc: 50S ribosomal protein L11
lpg0319	accession: PRK05424 name: rplA desc: 50S ribosomal protein L1
lpg0320	accession: PRK00099 name: rplJ desc: 50S ribosomal protein L10
lpg0321	accession: cd00387 name: Ribosomal_L7_L12 desc: Ribosomal protein L7/L12. accession: PRK00157 name: rplL desc: 50S ribosomal protein L7/L12
lpg0322	accession: cd00653 name: RNA_pol_B_RPB2 desc: RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. ... accession: pfam10385 name: RNA_pol_Rpb2_45 desc: RNA polymerase beta subunit external 1 domain accession: cl24026 name: RNA_pol_Rpb2_2 super family desc: RNA polymerase Rpb2, domain 2 accession: PRK00405 name: rpoB desc: DNA-directed RNA polymerase subunit beta
lpg0323	accession: cd01609 name: RNAP_beta'_N desc: Largest subunit (beta') of bacterial DNA-dependent RNA polymerase (RNAP), N-terminal domain accession: cd02655 name: RNAP_beta'_C desc: Largest subunit (beta') of Bacterial DNA-dependent RNA polymerase (RNAP), C-terminal domain accession: cl11429 name: RNAP_largest_subunit_C super family desc: Largest subunit of RNA polymerase (RNAP), C-terminal domain accession: PRK00566 name: PRK00566 desc: DNA-directed RNA polymerase subunit beta' Provisional
lpg0324	accession: PRK05163 name: rpsL desc: 30S ribosomal protein S12
lpg0325	accession: PRK05302 name: PRK05302 desc: 30S ribosomal protein S7
lpg0326	accession: cd01886 name: EF-G desc: Elongation factor G (EF-G) family involved in both the elongation and ribosome recycling accession: cd01434 name: EFG_mtEFG1_IV desc: EFG_mtEFG1_IV: domains similar to domain IV of the bacterial translational elongation factor accession: smart00838 name: EFG_C desc: Elongation factor G C-terminus accession: cd04088 name: EFG_mtEFG_II desc: Domain II of bacterial elongation factor G and C-terminal domain of mitochondrial Elongation factors G1 (mtEFG1) and G2 (mtEFG2) accession: cd16262 name: EFG_III desc: Domain III of Elongation Factor G (EFG) accession: PRK00007 name: PRK00007 desc: elongation factor G
lpg0327	accession: cd01884 name: EF_Tu desc: Elongation Factor Tu (EF-Tu) GTP-binding proteins EF-Tu subfamily. accession: cd03707 name: EFTU_III desc: Domain III of Elongation Factor (EF) Tu accession: cd03697 name: EFTU_II desc: Domain II of elongation factor Tu accession: PRK00049 name: PRK00049 desc: elongation factor Tu
lpg0328	accession: PRK00596 name: rpsJ desc: 30S ribosomal protein S10
lpg0329	accession: PRK00001 name: rplC desc: 50S ribosomal protein L3
lpg0330	accession: PRK05319 name: rplD desc: 50S ribosomal protein L4 Provisional
lpg0331	accession: PRK05738 name: rplW desc: 50S ribosomal protein L23
lpg0332	accession: pfam03947 name: Ribosomal_L2_C desc: Ribosomal Proteins L2, C-terminal domain accession: pfam00181 name: Ribosomal_L2 desc: Ribosomal Proteins L2, RNA binding domain accession: PRK09374 name: rplB desc: 50S ribosomal protein L2
lpg0334	accession: PRK00565 name: rplV desc: 50S ribosomal protein L22
lpg0335	accession: pfam00189 name: Ribosomal_S3_C desc: Ribosomal protein S3, C-terminal domain accession: cd02412 name: 30S_S3_KH desc: K homology RNA-binding (KH) domain of the prokaryotic 30S small ribosomal subunit protein S3. accession: PRK00310 name: rpsC desc: 30S ribosomal protein S3
lpg0336	accession: PRK09203 name: rplP desc: 50S ribosomal protein L16
lpg0337	accession: PRK00306 name: PRK00306 desc: 50S ribosomal protein L29
lpg0338	accession: PRK05610 name: rpsQ desc: 30S ribosomal protein S17
lpg0339	accession: PRK05483 name: rplN desc: 50S ribosomal protein L14
lpg0340	accession: PRK00004 name: rplX desc: 50S ribosomal protein L24
lpg0341	accession: pfam00673 name: Ribosomal_L5_C desc: ribosomal L5P family C-terminus This region is found associated with pfam00281. accession: pfam00281 name: Ribosomal_L5 desc: Ribosomal protein L5 accession: PRK00010 name: rplE desc: 50S ribosomal protein L5
lpg0342	accession: cl00355 name: Ribosomal_S14 super family desc: Ribosomal protein S14p/S29e
lpg0343	accession: PRK00136 name: rpsH desc: 30S ribosomal protein S8
lpg0344	accession: pfam00347 name: Ribosomal_L6 desc: Ribosomal protein L6 accession: pfam00347 name: Ribosomal_L6 desc: Ribosomal protein L6 accession: PRK05498 name: rplF desc: 50S ribosomal protein L6
lpg0345	accession: PRK05593 name: rplR desc: 50S ribosomal protein L18
lpg0346	accession: pfam00333 name: Ribosomal_S5 desc: Ribosomal protein S5, N-terminal domain accession: pfam03719 name: Ribosomal_S5_C desc: Ribosomal protein S5, C-terminal domain accession: PRK00550 name: rpsE desc: 30S ribosomal protein S5
lpg0347	accession: PRK05611 name: rpmD desc: 50S ribosomal protein L30
lpg0348	accession: PRK05592 name: rplO desc: 50S ribosomal protein L15
lpg0349	accession: pfam00344 name: ecY desc: SecY translocase accession: PRK09204 name: secY desc: preprotein translocase subunit SecY
lpg0350	accession: PRK00465 name: rpmJ desc: 50S ribosomal protein L36
lpg0351	accession: PRK05179 name: rpsM desc: 30S ribosomal protein S13 accession: COG0099 name: RpsM desc: Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
lpg0352	accession: PRK05309 name: desc: 30S ribosomal protein S11
lpg0353	accession: pfam00163 name: Ribosomal_S4 desc: Ribosomal protein S4/S9 N-terminal domain accession: cd00165 name: S4 desc: S4/Hsp/ tRNA synthetase RNA-binding domain accession: PRK05327 name: rpsD desc: 30S ribosomal protein S4
lpg0354	accession: cd06928 name: RNAP_alpha_NTD desc: N-terminal domain of the Alpha subunit of Bacterial RNA polymerase accession: pfam03118 name: RNA_pol_A_CTD desc: Bacterial RNA polymerase, alpha chain C terminal domain accession: PRK05182 name: PRK05182 desc: DNA-directed RNA polymerase subunit alpha Provisional
lpg0355	accession: PRK05591 name: rplQ desc: 50S ribosomal protein L17
lpg0356	accession: cl09930 name: RPA_2b-aaRSs_OBF_like super family desc: Replication protein A, class 2b aminoacyl-tRNA synthetases accession: COG0629 name: Ssb desc: Single-stranded DNA-binding protein [Replication, recombination and repair]
lpg0357	accession: cd06174 name: MFS desc: The Major Facilitator Superfamily (MFS) accession: pfam07690 name: MFS_1 desc: Major Facilitator Superfamily
lpg0358	accession: cd05359 name: ChcA_like_SDR_c desc: 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs accession: PRK08063 name: PRK08063 desc: enoyl-(acyl carrier protein) reductase Provisional
lpg0359	accession: PRK00982 name: acpP desc: acyl carrier protein Provisional
lpg0360	accession: cl00509 name: hot_dog super family desc: The hotdog fold was initially identified in the E. coli FabA accession: cl00509 name: hot_dog super family desc: The hotdog fold was initially identified in the E. coli FabA
lpg0361	accession: cd00834 name: KAS_I_II desc: Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS)
lpg0362	accession: cl09938 name: cond_enzymes super family desc: Condensing enzymes accession: COG0304 name: FabB desc: 3-oxoacyl-(acyl-carrier-protein) synthase
lpg0363	accession: cd07984 name: LPLAT_LABLAT-like desc: Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like
lpg0364	accession: pfam07238 name: PilZ desc: PilZ domain
lpg0366	accession: pfam01678 name: DAP_epimerase desc: Diaminopimelate epimerase accession: pfam01678 name: DAP_epimerase desc: Diaminopimelate epimerase accession: PRK00450 name: dapF desc: diaminopimelate epimerase
lpg0369	accession: cl21494 name: Abhydrolase super family desc: alpha/beta hydrolase
lpg0370	accession: cd07813 name: COQ10p_like desc: Coenzyme Q-binding protein COQ10p and similar proteins
lpg0371	accession: pfam03658 name: Ub-RnfH desc: RnfH family Ubiquitin
lpg0372	accession: pfam04355 name: SmpA_OmlA desc: SmpA / OmlA family
lpg0373	accession: cd01949 name: GGDEF desc: Diguanylate-cyclase (DGC) or GGDEF domain
lpg0377	accession: cl01522 name: FGase super family desc: N-formylglutamate amidohydrolase
lpg0378	accession: cl00954 name: GCS2 super family desc: Glutamate-cysteine ligase family 2(GCS2)
lpg0379	accession: pfam14401 name: RLAN desc: RimK-like ATPgrasp N-terminal domain accession: cl17255 name: ATP-grasp_4 super family desc: ATP-grasp domain accession: COG0189 name: RimK desc: Glutathione synthase/RimK-type ligase
lpg0380	accession: cl00296 name: Peptidase_C39_like super family desc: Peptidase family C39
lpg0381	accession: cl00509 name: hot_dog super family desc: The hotdog fold was initially identified in the E. coli FabA
lpg0382	accession: pfam04972 name: BON desc: BON domain This domain is found in a family of osmotic shock protection proteins accession: pfam04972 name: BON desc: BON domain This domain is found in a family of osmotic shock protection proteins
lpg0383	accession: cl12928 name: IcmL super family desc: Macrophage killing protein with similarity to conjugation protein
lpg0384	accession: cd03271 name: ABC_UvrA_II desc: ATP-binding cassette domain II of the excision repair protein UvrA accession: cd03270 name: ABC_UvrA_I desc: ATP-binding cassette domain I of the excision repair protein UvrA accession: cd03270 name: ABC_UvrA_I desc: ATP-binding cassette domain I of the excision repair protein UvrA accession: PRK00349 name: uvrA desc: excinuclease ABC subunit A
lpg0385	accession: pfam04011 name: LemA desc: LemA family The members of this family are related to the LemA protein
lpg0386	accession: cl12018 name: Peptidase_M48 super family desc: Peptidase family M48 accession: PRK02870 name: PRK02870 desc: heat shock protein HtpX Provisional
lpg0387	accession: PRK15066 name: PRK15066 desc: inner membrane transport permease Provisional accession: COG0842 name: YadH desc: ABC-type multidrug transport system, permease component [Defense mechanisms]
lpg0388	accession: cl21455 name: P-loop_NTPase super family desc: P-loop containing Nucleoside Triphosphate Hydrolases accession: COG1131 name: CcmA desc: ABC-type multidrug transport system, ATPase component [Defense mechanisms]
lpg0390	accession: pfam11932 name: DUF3450 desc: Protein of unknown function (DUF3450)
lpg0391	accession: cl21496 name: 2OG-FeII_Oxy super family desc: 2OG-Fe(II) oxygenase superfamily
lpg0392	accession: pfam01863 name: DUF45 desc: Protein of unknown function DUF45
lpg0394	accession: pfam01035 name: DNA_binding_1 desc: 6-O-methylguanine DNA methyltransferase, DNA binding domain accession: COG0350 name: AdaB desc: O6-methylguanine-DNA--protein-cysteine methyltransferase
lpg0395	accession: PRK05338 name: rplS desc: 50S ribosomal protein L19 Provisional
lpg0396	accession: PRK00026 name: trmD desc: tRNA (guanine-N(1)-)-methyltransferase
lpg0397	accession: pfam01782 name: RimM desc: RimM N-terminal domain accession: pfam05239 name: PRC desc: PRC-barrel domain accession: PRK00122 name: rimM desc: 16S rRNA-processing protein RimM Provisional
lpg0399	accession: PRK00040 name: rpsP desc: 30S ribosomal protein S16
lpg0400	accession: smart00962 name: SRP54 desc: SRP54-type protein, GTPase domain accession: pfam02978 name: SRP_SPB desc: Signal peptide binding domain accession: pfam02881 name: SRP54_N desc: SRP54-type protein, helical bundle domain accession: PRK10867 name: PRK10867 desc: signal recognition particle protein Provisional
lpg0402	accession: cd00204 name: ANK desc: ankyrin repeats accession: pfam12796 name: Ank_2 desc: Ankyrin repeats (3 copies)
lpg0403	accession: cd00204 name: ANK desc: ankyrin repeats accession: pfam12796 name: Ank_2 desc: Ankyrin repeats (3 copies) accession: pfam12796 name: Ank_2 desc: Ankyrin repeats (3 copies)
lpg0404	accession: TIGR03813 name: put_Glu_GABA_T desc: putative glutamate/gamma-aminobutyrate antiporter
lpg0406	accession: COG0599 name: YurZ desc: Uncharacterized conserved protein YurZ
lpg0408	accession: cl00649 name: DsbB super family desc: Disulfide bond formation protein DsbB
lpg0409	accession: cd06662 name: SURF1 desc: SURF1 superfamily.
lpg0411	accession: pfam02628 name: COX15-CtaA desc: Cytochrome oxidase assembly protein
lpg0412	accession: PRK04375 name: PRK04375 desc: protoheme IX farnesyltransferase Provisional
lpg0413	accession: cd02968 name: SCO desc: SCO (an acronym for Synthesis of Cytochrome c Oxidase) family
lpg0414	accession: cl17255 name: ATP-grasp_4 super family desc: ATP-grasp domain
lpg0415	accession: PRK13355 name: PRK13355 desc: bifunctional HTH-domain containing protein/aminotransferase Provisional
lpg0416	accession: pfam02781 name: G6PD_C desc: Glucose-6-phosphate dehydrogenase, C-terminal domain accession: pfam00479 name: G6PD_N desc: Glucose-6-phosphate dehydrogenase, NAD binding domain accession: PRK05722 name: PRK05722 desc: glucose-6-phosphate 1-dehydrogenase
lpg0417	accession: cd01400 name: 6PGL desc: 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily
lpg0418	accession: PRK09054 name: PRK09054 desc: phosphogluconate dehydratase
lpg0419	accession: pfam02685 name: Glucokinase desc: Glucokinase
lpg0420	accession: PRK05718 name: PRK05718 desc: keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase Provisional
lpg0421	accession: cd06174 name: MFS desc: The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters ... accession: pfam00083 name: Sugar_tr desc: Sugar (and other) transporter
lpg0422	accession: cl08284 name: Glyco_hydro_15 super family desc: Glycosyl hydrolases family 15
lpg0423	accession: COG3655 name: YozG desc: DNA-binding transcriptional regulator, XRE family [Transcription]
lpg0424	accession: pfam11188 name: DUF2975 desc: Protein of unknown function (DUF2975)
lpg0425	accession: cd00419 name: Ferrochelatase_C desc: Ferrochelatase, C-terminal domain accession: cd03411 name: Ferrochelatase_N desc: Ferrochelatase, N-terminal domain accession: PRK00035 name: hemH desc: ferrochelatase
lpg0426	accession: COG1278 name: CspC desc: Cold shock protein, CspA family [Transcription]
lpg0427	accession: cl00228 name: HIT_like super family desc: HIT family: HIT (Histidine triad) proteins
lpg0428	accession: cd06587 name: Glo_EDI_BRP_like desc: This domain superfamily is found in a variety of structurally related metalloproteins
lpg0429	accession: pfam02321 name: OEP desc: Outer membrane efflux protein accession: pfam02321 name: OEP desc: Outer membrane efflux protein
lpg0430	accession: pfam13533 name: Biotin_lipoyl_2 desc: Biotin-lipoyl like accession: pfam13437 name: HlyD_3 desc: HlyD family secretion protein accession: cl24690 name: PMT_4TMC super family desc: C-terminal four TMM region of protein-O-mannosyltransferase accession: COG1566 name: EmrA desc: Multidrug resistance efflux pump [Defense mechanisms]
lpg0431	accession: cl00857 name: DUF63 super family desc: Membrane protein of unknown function DUF63 accession: cl07347 name: GET2 super family desc: GET complex subunit GET2
lpg0432	accession: pfam13515 name: FUSC_2 desc: Fusaric acid resistance protein-like
lpg0433	accession: COG1733 name: HxlR desc: DNA-binding transcriptional regulator, HxlR family [Transcription]
lpg0434	accession: cl18775 name: COG4278 super family desc: Uncharacterized protein [Function unknown]
lpg0435	accession: pfam12847 name: Methyltransf_18 desc: Methyltransferase domain accession: COG0500 name: SmtA desc: SAM-dependent methyltransferase
lpg0436	accession: cd00204 name: ANK desc: ankyrin repeats accession: pfam12796 name: Ank_2 desc: Ankyrin repeats (3 copies)
lpg0442	accession: pfam12608 name: T4bSS_IcmS desc: Type IVb secretion, IcmS, effector-recruitment
lpg0444	accession: pfam09475 name: Dot_icm_IcmQ desc: Dot/Icm secretion system protein (dot_icm_IcmQ)
lpg0446	accession: cl21455 name: P-loop_NTPase super family desc: P-loop containing Nucleoside Triphosphate Hydrolases
lpg0447	accession: cd07185 name: OmpA_C-like desc: Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA
lpg0449	accession: pfam11393 name: IcmL desc: Macrophage killing protein with similarity to conjugation protein
lpg0450	accession: pfam12293 name: T4BSS_DotH_IcmK desc: Putative outer membrane core complex of type IVb secretion
lpg0451	accession: pfam03743 name: TrbI desc: Bacterial conjugation TrbI-like protein accession: pfam13599 name: Pentapeptide_4 desc: Pentapeptide repeats (9 copies)
lpg0452	accession: cl24006 name: YidC_periplas super family desc: YidC periplasmic domain
lpg0455	accession: smart00507 name: HNHc desc: HNH nucleases
lpg0456	accession: pfam12846 name: AAA_10 desc: AAA-like domain
lpg0457	accession: cd06174 name: MFS desc: Major Facilitator Superfamily (MFS)
lpg0458	accession: pfam06744 name: IcmF_C desc: Type VI secretion protein IcmF C-terminal accession: pfam14331 name: ImcF-related_N desc: ImcF-related N-terminal domain accession: cl06018 name: IcmF-related super family desc: Intracellular multiplication and human macrophage-killing
lpg0459	accession: TIGR03349 name: IV_VI_DotU desc: type IV / VI secretion system protein, DotU family
lpg0460	accession: smart00798 name: AICARFT_IMPCHas desc: AICARFT/IMPCHase bienzyme accession: cd01421 name: IMPCH desc: Inosine monophosphate cyclohydrolase domain accession: PRK00881 name: purH desc: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
lpg0461	accession: cl17173 name: AdoMet_MTases super family desc: S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I accession: PRK00517 name: prmA desc: ribosomal protein L11 methyltransferase
lpg0462	accession: pfam02786 name: CPSase_L_D2 desc: Carbamoyl-phosphate synthase L chain, ATP binding domain accession: pfam00289 name: CPSase_L_chain desc: Carbamoyl-phosphate synthase L chain, N-terminal domain accession: smart00878 name: Biotin_carb_C desc: Biotin carboxylase C-terminal domain accession: PRK08591 name: PRK08591 desc: acetyl-CoA carboxylase biotin carboxylase subunit
lpg_3050	accession: PRK00357 name: rpsS desc: 30S ribosomal protein S19

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